Index _ | A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | V | W | X _ _abc_impl (pygama.utils.NumbaPygamaDefaults attribute) _ak_l200_test_stat_time_term() (in module pygama.evt.modules.larveto) _argcheck() (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) _asdict() (pygama.evt.tcm.coin_groups method) (pygama.evt.utils.DataInfo method) (pygama.evt.utils.H5DataLoc method) (pygama.evt.utils.TCMData method) (pygama.pargen.dsp_optimize.OptimiserDimension method) (pygama.pargen.dsp_optimize.ParGridDimension method) _call() (pygama.pargen.energy_cal.TailPrior method) _cdf() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.poisson.PoissonGen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) _cdf_norm() (pygama.math.functions.pygama_continuous.PygamaContinuous method) _concat_tables() (in module pygama.evt.build_tcm) _extend_prior_with_posterior_data() (pygama.pargen.dsp_optimize.BayesianOptimizer method) _field_defaults (pygama.evt.tcm.coin_groups attribute) (pygama.evt.utils.DataInfo attribute) (pygama.evt.utils.H5DataLoc attribute) (pygama.evt.utils.TCMData attribute) (pygama.pargen.dsp_optimize.OptimiserDimension attribute) (pygama.pargen.dsp_optimize.ParGridDimension attribute) _fields (pygama.evt.tcm.coin_groups attribute) (pygama.evt.utils.DataInfo attribute) (pygama.evt.utils.H5DataLoc attribute) (pygama.evt.utils.TCMData attribute) (pygama.pargen.dsp_optimize.OptimiserDimension attribute) (pygama.pargen.dsp_optimize.ParGridDimension attribute) _get_dependencies() (in module pygama.hit.build_hit) _get_expected_improvement() (pygama.pargen.dsp_optimize.BayesianOptimizer method) _get_lcb() (pygama.pargen.dsp_optimize.BayesianOptimizer method) _get_next_probable_point() (pygama.pargen.dsp_optimize.BayesianOptimizer method) _get_support() (pygama.math.functions.uniform.UniformGen method) _get_ucb() (pygama.pargen.dsp_optimize.BayesianOptimizer method) _make() (pygama.evt.tcm.coin_groups class method) (pygama.evt.utils.DataInfo class method) (pygama.evt.utils.H5DataLoc class method) (pygama.evt.utils.TCMData class method) (pygama.pargen.dsp_optimize.OptimiserDimension class method) (pygama.pargen.dsp_optimize.ParGridDimension class method) _pdf() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) _pdf_norm() (pygama.math.functions.pygama_continuous.PygamaContinuous method) _pmf() (pygama.math.functions.poisson.PoissonGen method) _remove_uneeded_operations() (in module pygama.hit.build_hit) _reorder_table_operations() (in module pygama.hit.build_hit) _replace() (pygama.evt.tcm.coin_groups method) (pygama.evt.utils.DataInfo method) (pygama.evt.utils.H5DataLoc method) (pygama.evt.utils.TCMData method) (pygama.pargen.dsp_optimize.OptimiserDimension method) (pygama.pargen.dsp_optimize.ParGridDimension method) _value() (pygama.pargen.energy_cal.TailPrior method) A add_build_dsp_parser() (in module pygama.cli) add_build_hit_parser() (in module pygama.cli) add_build_raw_parser() (in module pygama.cli) add_dimension() (pygama.pargen.dsp_optimize.BayesianOptimizer method) (pygama.pargen.dsp_optimize.ParGrid method) add_initial_values() (pygama.pargen.dsp_optimize.BayesianOptimizer method) add_lh5ls_parser() (in module pygama.cli) aoe_peak_bounds() (in module pygama.pargen.AoE_cal) aoe_peak_fixed() (in module pygama.pargen.AoE_cal) aoe_peak_guess() (in module pygama.pargen.AoE_cal) apply_recovery_cut() (in module pygama.evt.modules.geds) apply_xtalk_correction() (in module pygama.evt.modules.geds) apply_xtalk_correction_and_calibrate() (in module pygama.evt.modules.geds) average_consecutive() (in module pygama.pargen.AoE_cal) average_counts_check() (in module pygama.pargen.energy_cal) B BayesianOptimizer (class in pygama.pargen.dsp_optimize) better_int_binning() (in module pygama.math.histogram) binned_lq_fit() (in module pygama.pargen.lq_cal) bounds() (pygama.pargen.energy_cal.FWHMLinear static method) (pygama.pargen.energy_cal.FWHMQuadratic static method) browse() (pygama.flow.data_loader.DataLoader method) build_dsp_cli() (in module pygama.cli) build_entry_list() (pygama.flow.data_loader.DataLoader method) build_evt() (in module pygama.evt.build_evt) build_evt_cols() (in module pygama.evt.build_evt) build_hit() (in module pygama.hit.build_hit) build_hit_cli() (in module pygama.cli) build_hit_entries() (pygama.flow.data_loader.DataLoader method) build_raw_cli() (in module pygama.cli) build_tcm() (in module pygama.evt.build_tcm) build_tcm_index_array() (in module pygama.evt.modules.xtalk) C CalAoE (class in pygama.pargen.AoE_cal) calculate_spread() (in module pygama.pargen.noise_optimization) calculate_survival_fractions() (pygama.pargen.AoE_cal.CalAoE method) calculate_survival_fractions_sweep() (pygama.pargen.AoE_cal.CalAoE method) calculate_time_means() (in module pygama.pargen.lq_cal) calibrate() (pygama.pargen.AoE_cal.CalAoE method) (pygama.pargen.lq_cal.LQCal method) calibrate_energy() (in module pygama.evt.modules.xtalk) calibrate_prominent_peak() (pygama.pargen.energy_cal.HPGeCalibration method) cdf_ext() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.poisson.PoissonGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) cdf_norm() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) coin_groups (class in pygama.evt.tcm) compton_sf() (in module pygama.pargen.survival_fractions) compton_sf_sweep() (in module pygama.pargen.survival_fractions) convert_rawid() (in module pygama.evt.modules.legend) convert_to_minuit() (in module pygama.pargen.utils) copy_lgdo_attrs() (in module pygama.evt.utils) copy_signature() (in module pygama.math.functions.sum_dists) CrystalBallGen (class in pygama.math.functions.crystal_ball) D DataInfo (class in pygama.evt.utils) DataLoader (class in pygama.flow.data_loader) dict_to_table() (in module pygama.flow.utils) dplms_ge_dict() (in module pygama.pargen.dplms_ge_dict) dpz_model() (in module pygama.pargen.pz_correct) dpz_model_fit() (in module pygama.pargen.pz_correct) draw_cdf() (pygama.math.functions.sum_dists.SumDists method) draw_pdf() (pygama.math.functions.sum_dists.SumDists method) drift_time_correction() (pygama.pargen.AoE_cal.CalAoE method) (pygama.pargen.lq_cal.LQCal method) drifttime_corr_plot() (in module pygama.pargen.AoE_cal) E energy_correction() (pygama.pargen.AoE_cal.CalAoE method) energy_guess() (in module pygama.pargen.survival_fractions) errordef (pygama.pargen.energy_cal.TailPrior attribute) eta_param (pygama.pargen.dsp_optimize.BayesianOptimizer attribute) evaluate_at_channel() (in module pygama.evt.aggregators) evaluate_at_channel_vov() (in module pygama.evt.aggregators) evaluate_expression() (in module pygama.evt.build_evt) evaluate_to_aoesa() (in module pygama.evt.aggregators) evaluate_to_first_or_last() (in module pygama.evt.aggregators) evaluate_to_scalar() (in module pygama.evt.aggregators) evaluate_to_vector() (in module pygama.evt.aggregators) evt (pygama.evt.utils.DataInfo attribute) ExgaussGen (class in pygama.math.functions.exgauss) ExponentialGen (class in pygama.math.functions.exponential) F factorial() (in module pygama.math.functions.poisson) fail_pdf_gos() (in module pygama.pargen.survival_fractions) fail_pdf_hpge() (in module pygama.pargen.survival_fractions) file (pygama.evt.utils.H5DataLoc attribute) FileDB (class in pygama.flow.file_db) fill_col_dict() (in module pygama.flow.utils) filter_hits() (in module pygama.evt.modules.xtalk) filter_synthesis() (in module pygama.pargen.dplms_ge_dict) find_bin() (in module pygama.math.histogram) find_parameters() (in module pygama.evt.utils) find_pulser_properties() (in module pygama.pargen.data_cleaning) fit_binned() (in module pygama.math.binned_fitting) fit_calibrated_peaks() (pygama.pargen.energy_cal.HPGeCalibration method) fit_distributions() (in module pygama.pargen.data_cleaning) fit_energy_res_curve() (pygama.pargen.energy_cal.HPGeCalibration static method) fit_simple_scaling() (in module pygama.math.least_squares) fit_time_means() (in module pygama.pargen.AoE_cal) (in module pygama.pargen.lq_cal) fit_unbinned() (in module pygama.math.unbinned_fitting) fix_all_but_nevents() (in module pygama.pargen.survival_fractions) fom_fwhm_no_alpha_sweep() (in module pygama.pargen.energy_optimisation) fom_fwhm_with_alpha_fit() (in module pygama.pargen.energy_optimisation) fom_interpolate_energy_res_with_single_peak_alpha_sweep() (in module pygama.pargen.energy_optimisation) fom_single_peak_alpha_sweep() (in module pygama.pargen.energy_optimisation) from_disk() (pygama.flow.file_db.FileDB method) full_calibration() (pygama.pargen.energy_cal.HPGeCalibration method) func() (pygama.pargen.AoE_cal.Pol1 static method) (pygama.pargen.AoE_cal.SigmaFit static method) (pygama.pargen.AoE_cal.SigmoidFit static method) (pygama.pargen.energy_cal.FWHMLinear static method) (pygama.pargen.energy_cal.FWHMQuadratic static method) FWHMLinear (class in pygama.pargen.energy_cal) FWHMQuadratic (class in pygama.pargen.energy_cal) G gather_energy() (in module pygama.evt.modules.xtalk) gather_pulse_data() (in module pygama.evt.modules.spms) gather_tcm_data() (in module pygama.evt.modules.spms) gauss_mode() (in module pygama.math.binned_fitting) gauss_mode_max() (in module pygama.math.binned_fitting) gauss_mode_width_max() (in module pygama.math.binned_fitting) GaussianGen (class in pygama.math.functions.gauss) geds_coincidence_classifier() (in module pygama.evt.modules.spms) gen_pars_dict() (pygama.pargen.energy_cal.HPGeCalibration method) generate_cut_classifiers() (in module pygama.pargen.data_cleaning) generate_cuts() (in module pygama.pargen.data_cleaning) generate_tcm_cols() (in module pygama.evt.tcm) get_aoe_cut_fit() (pygama.pargen.AoE_cal.CalAoE method) get_areas_fracs() (in module pygama.math.functions.sum_dists) get_best_vals() (pygama.pargen.dsp_optimize.BayesianOptimizer method) get_bin_centers() (in module pygama.math.histogram) get_bin_estimates() (in module pygama.math.histogram) get_bin_widths() (in module pygama.math.histogram) get_bounds() (in module pygama.pargen.survival_fractions) get_cdf() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.poisson.PoissonGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) get_cut_indexes() (in module pygama.pargen.data_cleaning) get_cut_lq_dep() (pygama.pargen.lq_cal.LQCal method) get_data() (pygama.pargen.dsp_optimize.ParGrid method) get_data_at_channel() (in module pygama.evt.utils) get_dists_and_par_idxs() (in module pygama.math.functions.sum_dists) get_dpz_decay_constants() (pygama.pargen.pz_correct.PZCorrect method) get_energy_res_curve() (pygama.pargen.energy_cal.HPGeCalibration method) get_file_list() (pygama.flow.data_loader.DataLoader method) get_first_point() (pygama.pargen.dsp_optimize.BayesianOptimizer method) get_fit_range() (in module pygama.pargen.lq_cal) get_formatted_stats() (in module pygama.math.utils) get_fwfm() (in module pygama.math.histogram) (pygama.math.functions.sum_dists.SumDists method) get_fwhm() (in module pygama.math.histogram) (pygama.math.functions.sum_dists.SumDists method) get_fwhms() (pygama.pargen.energy_cal.HPGeCalibration method) get_gaussian_guess() (in module pygama.math.histogram) get_grid_points() (in module pygama.pargen.dsp_optimize) get_hist() (in module pygama.math.histogram) get_hpge_energy_bounds() (in module pygama.pargen.energy_cal) get_hpge_energy_fixed() (in module pygama.pargen.energy_cal) get_hpge_energy_peak_par_guess() (in module pygama.pargen.energy_cal) get_i_local_extrema() (in module pygama.math.histogram) get_i_local_maxima() (in module pygama.math.histogram) get_i_local_minima() (in module pygama.math.histogram) get_keys() (in module pygama.pargen.data_cleaning) get_lq_hist() (in module pygama.pargen.lq_cal) get_mask_from_query() (in module pygama.evt.utils) get_mode() (pygama.math.functions.sum_dists.SumDists method) get_mode_stdev() (in module pygama.pargen.data_cleaning) get_mu() (pygama.math.functions.sum_dists.SumDists method) get_n_dimensions() (pygama.pargen.dsp_optimize.BayesianOptimizer method) (pygama.pargen.dsp_optimize.ParGrid method) get_n_grid_points() (pygama.pargen.dsp_optimize.ParGrid method) get_n_points_of_dim() (pygama.pargen.dsp_optimize.ParGrid method) get_par_meshgrid() (pygama.pargen.dsp_optimize.ParGrid method) get_par_names() (in module pygama.math.utils) get_parameter_names() (in module pygama.math.functions.sum_dists) get_pdf() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) get_peak_fwhm_with_dt_corr() (in module pygama.pargen.energy_optimisation) get_peak_label() (in module pygama.pargen.AoE_cal) get_pmf() (pygama.math.functions.poisson.PoissonGen method) get_sf_sweep() (in module pygama.pargen.survival_fractions) get_shape() (pygama.pargen.dsp_optimize.ParGrid method) get_single_decay_constant() (pygama.pargen.pz_correct.PZCorrect method) get_survival_fraction() (in module pygama.pargen.survival_fractions) get_table_columns() (pygama.flow.file_db.FileDB method) get_table_name() (pygama.flow.file_db.FileDB method) get_table_name_by_pattern() (in module pygama.evt.utils) get_tcm_id_by_pattern() (in module pygama.evt.utils) get_tcm_pulser_ids() (in module pygama.pargen.data_cleaning) get_tiers_for_col() (pygama.flow.data_loader.DataLoader method) get_total_events() (pygama.math.functions.sum_dists.SumDists method) get_xtalk_correction() (in module pygama.evt.modules.xtalk) get_zero_indices() (pygama.pargen.dsp_optimize.ParGrid method) getenv_bool() (in module pygama.utils) goodness_of_fit() (in module pygama.math.binned_fitting) group (pygama.evt.utils.H5DataLoc attribute) guess() (pygama.pargen.AoE_cal.Pol1 static method) (pygama.pargen.AoE_cal.SigmaFit static method) (pygama.pargen.AoE_cal.SigmoidFit static method) (pygama.pargen.energy_cal.FWHMLinear static method) (pygama.pargen.energy_cal.FWHMQuadratic static method) H H5DataLoc (class in pygama.evt.utils) hpge_cal_energy_peak_tops() (pygama.pargen.energy_cal.HPGeCalibration method) hpge_find_energy_peaks() (pygama.pargen.energy_cal.HPGeCalibration method) hpge_fit_energy_cal_func() (in module pygama.pargen.energy_cal) hpge_fit_energy_peak_tops() (in module pygama.pargen.energy_cal) hpge_fit_energy_peaks() (pygama.pargen.energy_cal.HPGeCalibration method) hpge_fit_energy_scale() (in module pygama.pargen.energy_cal) hpge_get_energy_peaks() (pygama.pargen.energy_cal.HPGeCalibration method) hpge_get_fwfm() (in module pygama.math.functions.hpge_peak) hpge_get_fwhm() (in module pygama.math.functions.hpge_peak) hpge_get_mode() (in module pygama.math.functions.hpge_peak) hpge_peak_fwfm() (in module pygama.math.hpge_peak_fitting) hpge_peak_fwhm() (in module pygama.math.hpge_peak_fitting) hpge_peak_mode() (in module pygama.math.hpge_peak_fitting) hpge_peak_parameter_gradient() (in module pygama.math.hpge_peak_fitting) hpge_peak_peakshape_derivative() (in module pygama.math.hpge_peak_fitting) HPGeCalibration (class in pygama.pargen.energy_cal) I inplace_sort() (in module pygama.flow.utils) interpolate_consecutive() (in module pygama.pargen.AoE_cal) interpolate_energy_res() (pygama.pargen.energy_cal.HPGeCalibration static method) is_not_pile_up() (in module pygama.pargen.dplms_ge_dict) is_valid_centroid() (in module pygama.pargen.dplms_ge_dict) is_valid_risetime() (in module pygama.pargen.dplms_ge_dict) iskeyword() (in module pygama.flow.data_loader) iterate_indices() (pygama.pargen.dsp_optimize.ParGrid method) iterate_values() (pygama.pargen.dsp_optimize.BayesianOptimizer method) L l200_combined_test_stat() (in module pygama.evt.modules.larveto) l200_rc_amp_logpdf() (in module pygama.evt.modules.larveto) l200_tc_time_pdf() (in module pygama.evt.modules.larveto) l200_test_stat() (in module pygama.evt.modules.larveto) lambda_param (pygama.pargen.dsp_optimize.BayesianOptimizer attribute) lh5_show_cli() (in module pygama.cli) linear_dpz_fit() (in module pygama.pargen.pz_correct) linear_fit_by_sums() (in module pygama.math.least_squares) LinearGen (class in pygama.math.functions.linear) load() (pygama.flow.data_loader.DataLoader method) load_cal_pars() (pygama.flow.data_loader.DataLoader method) load_data() (in module pygama.pargen.utils) load_detector() (pygama.flow.data_loader.DataLoader method) load_dict() (in module pygama.utils) load_dsp_pars() (pygama.flow.data_loader.DataLoader method) load_evts() (pygama.flow.data_loader.DataLoader method) load_hits() (pygama.flow.data_loader.DataLoader method) load_iterator() (pygama.flow.data_loader.DataLoader method) load_settings() (pygama.flow.data_loader.DataLoader method) logpdf() (pygama.math.functions.pygama_continuous.NumbaFrozen method) lq_timecorr() (pygama.pargen.lq_cal.LQCal method) LQCal (class in pygama.pargen.lq_cal) M make_files_config() (in module pygama.evt.utils) make_numpy_full() (in module pygama.evt.utils) make_pulse_data_mask() (in module pygama.evt.modules.spms) max_val (pygama.pargen.dsp_optimize.OptimiserDimension attribute) metadata() (in module pygama.evt.modules.legend) min_val (pygama.pargen.dsp_optimize.OptimiserDimension attribute) module pygama pygama.cli pygama.evt pygama.evt.aggregators pygama.evt.build_evt pygama.evt.build_tcm pygama.evt.modules pygama.evt.modules.geds pygama.evt.modules.larveto pygama.evt.modules.legend pygama.evt.modules.spms pygama.evt.modules.xtalk pygama.evt.tcm pygama.evt.utils pygama.flow pygama.flow.data_loader pygama.flow.file_db pygama.flow.utils pygama.hit pygama.hit.build_hit pygama.logging pygama.math pygama.math.binned_fitting pygama.math.distributions pygama.math.functions pygama.math.functions.crystal_ball pygama.math.functions.error_function pygama.math.functions.exgauss pygama.math.functions.exponential pygama.math.functions.gauss pygama.math.functions.gauss_on_exgauss pygama.math.functions.gauss_on_exponential pygama.math.functions.gauss_on_linear pygama.math.functions.gauss_on_step pygama.math.functions.gauss_on_uniform pygama.math.functions.hpge_peak pygama.math.functions.linear pygama.math.functions.moyal pygama.math.functions.poisson pygama.math.functions.polynomial pygama.math.functions.pygama_continuous pygama.math.functions.step pygama.math.functions.sum_dists pygama.math.functions.triple_gauss_on_double_step pygama.math.functions.uniform pygama.math.histogram pygama.math.hpge_peak_fitting pygama.math.least_squares pygama.math.unbinned_fitting pygama.math.units pygama.math.utils pygama.pargen pygama.pargen.AoE_cal pygama.pargen.data_cleaning pygama.pargen.dplms_ge_dict pygama.pargen.dsp_optimize pygama.pargen.energy_cal pygama.pargen.energy_optimisation pygama.pargen.lq_cal pygama.pargen.noise_optimization pygama.pargen.pz_correct pygama.pargen.survival_fractions pygama.pargen.utils pygama.utils MoyalGen (class in pygama.math.functions.moyal) N name (pygama.evt.tcm.coin_groups attribute) (pygama.pargen.dsp_optimize.OptimiserDimension attribute) (pygama.pargen.dsp_optimize.ParGridDimension attribute) nb_crystal_ball_cdf() (in module pygama.math.functions.crystal_ball) nb_crystal_ball_pdf() (in module pygama.math.functions.crystal_ball) nb_crystal_ball_scaled_cdf() (in module pygama.math.functions.crystal_ball) nb_crystal_ball_scaled_pdf() (in module pygama.math.functions.crystal_ball) nb_erf() (in module pygama.math.functions.error_function) nb_erfc() (in module pygama.math.functions.error_function) nb_exgauss_cdf() (in module pygama.math.functions.exgauss) nb_exgauss_pdf() (in module pygama.math.functions.exgauss) nb_exgauss_scaled_cdf() (in module pygama.math.functions.exgauss) nb_exgauss_scaled_pdf() (in module pygama.math.functions.exgauss) nb_exponential_cdf() (in module pygama.math.functions.exponential) nb_exponential_pdf() (in module pygama.math.functions.exponential) nb_exponential_scaled_cdf() (in module pygama.math.functions.exponential) nb_exponential_scaled_pdf() (in module pygama.math.functions.exponential) nb_gauss() (in module pygama.math.functions.gauss) nb_gauss_amp() (in module pygama.math.functions.gauss) nb_gauss_cdf() (in module pygama.math.functions.gauss) nb_gauss_pdf() (in module pygama.math.functions.gauss) nb_gauss_scaled_cdf() (in module pygama.math.functions.gauss) nb_gauss_scaled_pdf() (in module pygama.math.functions.gauss) nb_gauss_tail_approx() (in module pygama.math.functions.exgauss) nb_gauss_tail_exact() (in module pygama.math.functions.exgauss) nb_linear_cdf() (in module pygama.math.functions.linear) nb_linear_pdf() (in module pygama.math.functions.linear) nb_linear_scaled_cdf() (in module pygama.math.functions.linear) nb_linear_scaled_pdf() (in module pygama.math.functions.linear) nb_moyal_cdf() (in module pygama.math.functions.moyal) nb_moyal_pdf() (in module pygama.math.functions.moyal) nb_moyal_scaled_cdf() (in module pygama.math.functions.moyal) nb_moyal_scaled_pdf() (in module pygama.math.functions.moyal) nb_poisson_cdf() (in module pygama.math.functions.poisson) nb_poisson_pmf() (in module pygama.math.functions.poisson) nb_poisson_scaled_cdf() (in module pygama.math.functions.poisson) nb_poisson_scaled_pmf() (in module pygama.math.functions.poisson) nb_poly() (in module pygama.math.functions.polynomial) nb_step_cdf() (in module pygama.math.functions.step) nb_step_int() (in module pygama.math.functions.step) nb_step_pdf() (in module pygama.math.functions.step) nb_step_scaled_cdf() (in module pygama.math.functions.step) nb_step_scaled_pdf() (in module pygama.math.functions.step) nb_uniform_cdf() (in module pygama.math.functions.uniform) nb_uniform_pdf() (in module pygama.math.functions.uniform) nb_uniform_scaled_cdf() (in module pygama.math.functions.uniform) nb_uniform_scaled_pdf() (in module pygama.math.functions.uniform) nb_unnorm_step_pdf() (in module pygama.math.functions.step) next() (pygama.flow.data_loader.DataLoader method) noise_matrix() (in module pygama.pargen.dplms_ge_dict) noise_optimization() (in module pygama.pargen.noise_optimization) NumbaFrozen (class in pygama.math.functions.pygama_continuous) NumbaPygamaDefaults (class in pygama.utils) O OptimiserDimension (class in pygama.pargen.dsp_optimize) P parameter (pygama.pargen.dsp_optimize.OptimiserDimension attribute) (pygama.pargen.dsp_optimize.ParGridDimension attribute) ParGrid (class in pygama.pargen.dsp_optimize) ParGridDimension (class in pygama.pargen.dsp_optimize) pass_pdf_gos() (in module pygama.pargen.survival_fractions) pass_pdf_hpge() (in module pygama.pargen.survival_fractions) pdf() (pygama.math.functions.pygama_continuous.NumbaFrozen method) pdf_ext() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) pdf_norm() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) plot() (pygama.pargen.dsp_optimize.BayesianOptimizer method) plot_acq() (pygama.pargen.dsp_optimize.BayesianOptimizer method) plot_aoe_mean_time() (in module pygama.pargen.AoE_cal) plot_aoe_res_time() (in module pygama.pargen.AoE_cal) plot_cal_fit() (pygama.pargen.energy_cal.HPGeCalibration method) plot_cal_fit_with_errors() (pygama.pargen.energy_cal.HPGeCalibration method) plot_classifier() (in module pygama.pargen.AoE_cal) (in module pygama.pargen.lq_cal) plot_compt_bands_overlayed() (in module pygama.pargen.AoE_cal) plot_cut_fit() (in module pygama.pargen.AoE_cal) plot_drift_time_correction() (in module pygama.pargen.lq_cal) plot_dt_dep() (in module pygama.pargen.AoE_cal) plot_eres_fit() (pygama.pargen.energy_cal.HPGeCalibration method) plot_fits() (pygama.pargen.energy_cal.HPGeCalibration method) plot_hist() (in module pygama.math.histogram) plot_lq_cut_fit() (in module pygama.pargen.lq_cal) plot_lq_mean_time() (in module pygama.pargen.lq_cal) plot_mean_fit() (in module pygama.pargen.AoE_cal) plot_sf_vs_energy() (in module pygama.pargen.AoE_cal) (in module pygama.pargen.lq_cal) plot_sigma_fit() (in module pygama.pargen.AoE_cal) plot_slopes() (pygama.pargen.pz_correct.PZCorrect method) plot_spectra() (in module pygama.pargen.AoE_cal) (in module pygama.pargen.lq_cal) plot_survival_fraction_curves() (in module pygama.pargen.AoE_cal) (in module pygama.pargen.lq_cal) plot_waveforms_after_correction() (pygama.pargen.pz_correct.PZCorrect method) pmf_ext() (pygama.math.functions.poisson.PoissonGen method) poisson_gof() (in module pygama.math.binned_fitting) PoissonGen (class in pygama.math.functions.poisson) Pol1 (class in pygama.pargen.AoE_cal) poly_match() (in module pygama.pargen.energy_cal) poly_wrapper() (in module pygama.pargen.energy_cal) print_data() (pygama.pargen.dsp_optimize.ParGrid method) print_fit_results() (in module pygama.math.utils) pulse_amp_round() (in module pygama.evt.modules.larveto) pygama module pygama.cli module pygama.evt module pygama.evt.aggregators module pygama.evt.build_evt module pygama.evt.build_tcm module pygama.evt.modules module pygama.evt.modules.geds module pygama.evt.modules.larveto module pygama.evt.modules.legend module pygama.evt.modules.spms module pygama.evt.modules.xtalk module pygama.evt.tcm module pygama.evt.utils module pygama.flow module pygama.flow.data_loader module pygama.flow.file_db module pygama.flow.utils module pygama.hit module pygama.hit.build_hit module pygama.logging module pygama.math module pygama.math.binned_fitting module pygama.math.distributions module pygama.math.functions module pygama.math.functions.crystal_ball module pygama.math.functions.error_function module pygama.math.functions.exgauss module pygama.math.functions.exponential module pygama.math.functions.gauss module pygama.math.functions.gauss_on_exgauss module pygama.math.functions.gauss_on_exponential module pygama.math.functions.gauss_on_linear module pygama.math.functions.gauss_on_step module pygama.math.functions.gauss_on_uniform module pygama.math.functions.hpge_peak module pygama.math.functions.linear module pygama.math.functions.moyal module pygama.math.functions.poisson module pygama.math.functions.polynomial module pygama.math.functions.pygama_continuous module pygama.math.functions.step module pygama.math.functions.sum_dists module pygama.math.functions.triple_gauss_on_double_step module pygama.math.functions.uniform module pygama.math.histogram module pygama.math.hpge_peak_fitting module pygama.math.least_squares module pygama.math.unbinned_fitting module pygama.math.units module pygama.math.utils module pygama.pargen module pygama.pargen.AoE_cal module pygama.pargen.data_cleaning module pygama.pargen.dplms_ge_dict module pygama.pargen.dsp_optimize module pygama.pargen.energy_cal module pygama.pargen.energy_optimisation module pygama.pargen.lq_cal module pygama.pargen.noise_optimization module pygama.pargen.pz_correct module pygama.pargen.survival_fractions module pygama.pargen.utils module pygama.utils module pygama_cli() (in module pygama.cli) PygamaContinuous (class in pygama.math.functions.pygama_continuous) PZCorrect (class in pygama.pargen.pz_correct) R range_slice() (in module pygama.math.histogram) raw (pygama.evt.utils.DataInfo attribute) readd_attrs() (in module pygama.evt.build_tcm) required_args() (pygama.math.functions.crystal_ball.CrystalBallGen method) (pygama.math.functions.exgauss.ExgaussGen method) (pygama.math.functions.exponential.ExponentialGen method) (pygama.math.functions.gauss.GaussianGen method) (pygama.math.functions.linear.LinearGen method) (pygama.math.functions.moyal.MoyalGen method) (pygama.math.functions.poisson.PoissonGen method) (pygama.math.functions.pygama_continuous.NumbaFrozen method) (pygama.math.functions.step.StepGen method) (pygama.math.functions.sum_dists.SumDists method) (pygama.math.functions.uniform.UniformGen method) reset() (pygama.flow.data_loader.DataLoader method) return_nans() (in module pygama.pargen.utils) round (pygama.pargen.dsp_optimize.OptimiserDimension attribute) row_in_table (pygama.evt.utils.TCMData attribute) run_bayesian_optimisation() (in module pygama.pargen.dsp_optimize) run_grid() (in module pygama.pargen.dsp_optimize) run_grid_point() (in module pygama.pargen.dsp_optimize) run_one_dsp() (in module pygama.pargen.dsp_optimize) S scan_daq_files() (pygama.flow.file_db.FileDB method) scan_files() (pygama.flow.file_db.FileDB method) scan_tables_columns() (pygama.flow.file_db.FileDB method) set_config() (pygama.flow.data_loader.DataLoader method) (pygama.flow.file_db.FileDB method) set_cuts() (pygama.flow.data_loader.DataLoader method) set_datastreams() (pygama.flow.data_loader.DataLoader method) set_dsp_pars() (pygama.pargen.dsp_optimize.ParGrid method) set_file_sizes() (pygama.flow.file_db.FileDB method) set_file_status() (pygama.flow.file_db.FileDB method) set_files() (pygama.flow.data_loader.DataLoader method) set_output() (pygama.flow.data_loader.DataLoader method) setup() (in module pygama.logging) SigmaFit (class in pygama.pargen.AoE_cal) SigmoidFit (class in pygama.pargen.AoE_cal) signal_matrices() (in module pygama.pargen.dplms_ge_dict) signal_selection() (in module pygama.pargen.dplms_ge_dict) simple_gaussian_fit() (in module pygama.pargen.noise_optimization) simple_gaussian_guess() (in module pygama.pargen.noise_optimization) simple_guess() (in module pygama.pargen.energy_optimisation) sizeof_fmt() (in module pygama.math.utils) skewed_fit() (in module pygama.pargen.data_cleaning) skewed_pdf() (in module pygama.pargen.data_cleaning) skim_waveforms() (pygama.flow.data_loader.DataLoader method) StepGen (class in pygama.math.functions.step) string_func() (pygama.pargen.AoE_cal.Pol1 static method) (pygama.pargen.AoE_cal.SigmaFit static method) (pygama.pargen.energy_cal.FWHMLinear static method) (pygama.pargen.energy_cal.FWHMQuadratic static method) sum_bins() (in module pygama.pargen.energy_cal) SumDists (class in pygama.math.functions.sum_dists) T table_fmt (pygama.evt.utils.H5DataLoc attribute) table_key (pygama.evt.utils.TCMData attribute) tag_pulsers() (in module pygama.pargen.data_cleaning) TailPrior (class in pygama.pargen.energy_cal) taylor_mode_max() (in module pygama.math.binned_fitting) tcm (pygama.evt.utils.DataInfo attribute) TCMData (class in pygama.evt.utils) time_correction() (pygama.pargen.AoE_cal.CalAoE method) to_datetime() (in module pygama.flow.utils) to_disk() (pygama.flow.file_db.FileDB method) to_unixtime() (in module pygama.flow.utils) tp100_align() (in module pygama.pargen.pz_correct) U unbinned_aoe_fit() (in module pygama.pargen.AoE_cal) unbinned_staged_energy_fit() (in module pygama.pargen.energy_cal) UniformGen (class in pygama.math.functions.uniform) unit (pygama.pargen.dsp_optimize.OptimiserDimension attribute) update() (pygama.pargen.dsp_optimize.BayesianOptimizer method) update_cal_dicts() (pygama.pargen.AoE_cal.CalAoE method) (pygama.pargen.lq_cal.LQCal method) update_db_dict() (pygama.pargen.dsp_optimize.BayesianOptimizer method) update_guess() (in module pygama.pargen.survival_fractions) update_results_dict() (pygama.pargen.energy_cal.HPGeCalibration method) V value_strs (pygama.pargen.dsp_optimize.ParGridDimension attribute) verbose (pygama.pargen.energy_cal.TailPrior attribute) W window (pygama.evt.tcm.coin_groups attribute) window_ref (pygama.evt.tcm.coin_groups attribute) X xtalk_correct_energy_impl() (in module pygama.evt.modules.xtalk)